Inter national J our nal of Adv ances in A pplied Sciences (IJ AAS) V ol. 15, No. 3, September 2026, pp. 1193 ∼ 1202 ISSN: 2252-8814, DOI: 10.11591/ijaas.v15.i3.pp1193-1202 ❒ 1193 Mapping signicant clinical factors to r elapse-fr ee sur vi v al pr ognosis in br east cancer patients Boby Al Qurthuby , I Made Murwantara Master of Informatics, F aculty of Articial Intelligence and Data Science, Uni v ersitas Pelita Harapan, Jakarta, Indonesia Article Inf o Article history: Recei v ed May 27, 2025 Re vised Jun 14, 2026 Accepted Aug 13, 2026 K eyw ords: Breast cancer Cox re gression Kaplan-Meier Relapse-free survi v al Survi v al analysis ABSTRA CT This study e xplores the role of clinical f actors in inuencing relapse-free survi v al (RFS) in breast cancer patients through comprehensi v e survi v al analysis (SA). The data were deri v ed from a lar ge cohort of breast cancer patients, encompassing clinical v ariables such as age at diagnosis, tumor size, number of positi v e lymph nodes, tumor grade, histological subtype, and receipt of chemotherap y and radiotherap y . Analytical methods included Kaplan-Meier plots, log-rank tests, Cox proportional hazards modeling, and feature ranking based on uni v ariate and multi v ariate log-rank and Cox tests. The results sho w that patients who recei v ed chemotherap y demonstrated a shorter median RFS compared to those who did not (102.7 vs. 145.0 months, p = 0.03), lik ely due to high-risk patie nts being selected for chemotherap y . Meanwhile, radiotherap y w as associated wit h impro v ed prognosis (hazard ratio (HR) < 1 in Cox model, p < 10 − 5 ), in line with meta-analyses sho wing reduced breast cancer mortality post-radiotherap y . The contrib uti on maps the k e y clinical determinants of RFS in breast cancer and highlights the practicality of performing SA. This is an open access article under the CC BY -SA license . Corresponding A uthor: I Made Murw antara Master of Informatics, F aculty of Articial Intelligence and Data Science, Uni v ersitas Pelita Harapan Jakarta, Indonesia Email: made.murw antara@uph.edu 1. INTR ODUCTION Breast cancer remains one of the most pre v alent oncological diseases among w omen globally [1], [2], contrib uting substantially to morbidity and mortality rates. Despite adv ancements in diagnostic and therapeutic modalities, the risk of relapse continues to pose a signicant clinical challenge. Relapse-free survi v al (RFS) [3], dened as the time from initial treatment to the recurrence of disease, is a crucial endpoint for e v aluating treatment ef cac y and tumor characteristics. Pre vious studies ha v e demonstrated that traditional clinical f actors such as tumor grade, tumor size, and lymph node in v olv ement play a signicant role in determining RFS. Ka w ase et al . [4] found that higher -grade tumors and positi v e nodal status were independently associated with shorter RFS, e v en after mult i v ariate analysis. Lar ge cohort studies ha v e consistently sho wn that increases in tumor size and nodal spread signal a w orsening prognosis [5]. In addition to that, biological mark ers such as hormone receptor status and histological subtypes [6]–[8] are kno wn to present dif fering prognoses [9]. Where hormone receptor status [10] refers to whether a tumor’ s cells e xpress receptors for the female se x hormones—estrogen (ER) [11] and progesterone (PR) [12]—which dri v e cell gro wth and dif ferentiation in hormone-sensiti v e tissues. Adjuv ant interv entions [13], including chemotherap y [14] and radiotherap y [15], play a s ignicant role in impro ving RFS outcomes in cancer patients. These treatments, administered after the primary J ournal homepage: http://ijaas.iaescor e .com Evaluation Warning : The document was created with Spire.PDF for Python.
1194 ❒ ISSN: 2252-8814 interv ention such as sur gery , are designed to eliminate residual disease and reduce the lik elihood of recurrence, thereby e xtending the duration of remission and impro ving long-term survi v al rates. Among the v arious chemotherap y re gimens, anthrac ycline-based [16] adjuv ant therap y has been e xtensi v ely studied and widely adopted in clinical practice, particularly in the management of breast cancer . Evidence from lar ge-scale clinical trials and meta-analyses indicates that this class of drugs can signicantly reduce breast cancer mortality . The e xtent of the benet, ho we v er , can v ary based on se v eral patient-related f actors, including age and tumor characteristics. Specically , anthrac ycline-based re gimens ha v e been associated [17], [18], with a 20% to 38% reduction in mortality , demonstrating a substantial impro v ement in prognosis when used as part of a comprehensi v e treatment strate gy . Radiotherap y [19], particularly after sur gical resection of the primary tumor , is another cri tical component of adjuv ant treatment. Its primary objecti v e is to eradicate an y microscopic residual tumor cells at the site of sur gery , which are often responsible for local recurrence. Numerous studies ha v e sho wn that postsur gical radiotherap y not only lo wers the risk of local recurrence b ut also contrib utes to a meaningful decrease in long-term mortality . F or patients under going breast-conserving sur gery , the addition of radiotherap y has become a standard of care due to its pro v en ability to enhance local control and survi v al outcomes. The inte gration of these adjuv ant modalities into treatment protocols has led to notable impro v ements in RFS curv es in v arious types of cancer , especially early stage breas t cancer . The benets are particularly e vident in the subgroups of patients with high-risk pathological characteristics, where the risk of recurrence without adjuv ant therap y w ould otherwise be substanti al. Importantly , the ef fecti v eness of adjuv ant therap y must be balanced ag ainst potential toxicities and patient comorbidities, which can inuence treatment tolerance and results. This study contrib utes by enhancing the analytical capability to in v estig ate the relationship between v arious clinical v ariables and RFS in breast cancer patients. By applying survi v al analysis (SA) model, it of fers deeper insights into ho w specic clinical f actors inuence patient outcomes, potentially guiding more ef fecti v e treatment and follo w-up strate gies. 2. METHOD 2.1. Data collection Dataset for this study w as from the molecular taxonomy of breast cancer international consortium (MET ABRIC) [20]–[22]. MET ABRIC analyzed genomic and transcriptomic data from approximately 2,000 primary breast tumors, inte grating this information with long-term clinical outcomes. This comprehensi v e approach enabled the identication of ten distinct m olecular subtypes of breast cancer , each characterized by unique genomic dri v ers and associated with specic clinical prognoses. The MET ABRIC dataset a v ailable via cBioPortal and the European genome-phenome archi v e. K e y features in the dataset include age at diagnosis, which serv es as an important demographic f actor kno wn to inuence disease progression and treatment response. T umor size, measured in millimeters, and the number of positi v e lymph nodes are included as indicators of cancer stage and spread—both strong prognostic mark ers for SA. T umor grade, classied from I to III, reects the le v el of abnormality of the cancer cells, with higher grades typically associated with more aggressi v e disease. Histological subtypes [23], such as ductal, lob ular , tub ular , and mucinous carcinomas, is also recorded to account for biological heterogeneity within breast cancer cases. These subtypes dif fer in clinical beha vior and may respond dif ferently to therap y . Additionally , treatment v ariables such as the admini stration of chemotherap y (yes/no) and the receipt of radiotherap y (yes/no) are included. These v ariables are particularly rele v ant as the y are kno wn to inuence RFS outcomes by reducing the risk of recurrence. 2.2. Data pr epr ocessing The data preprocessing in this study w as conducted using the Orange3 platform and comprised se v eral essential steps. The MET ABRIC dataset, which includes 1,904 breast cancer patients and o v er 24,000 clinical and genetic features, serv ed as the primary data source. Cate gorical v ariables such as tumor grade, chemotherap y , and radiotherap y were con v erted into numerical format using the “First v alue as base” method to f acilitate statistical analysis. Numerical features including tumor size, age at diagnosis, and lymph nodes e xamined positi v e were normalized to a [0, 1] range and subsequently discretized into three interv als using the equal frequenc y discretization method for Kaplan-M eier analysis. Rele v ant features were selected, consisting of six clinical predictors and RFS time as the tar get v ariable. Missing v alues were imputed using the a v erage or most frequent method to ensure a complete and analyzable dataset. Finally , the data were Int J Adv Appl Sci, V ol. 15, No. 3, September 2026: 1193–1202 Evaluation Warning : The document was created with Spire.PDF for Python.
Int J Adv Appl Sci ISSN: 2252-8814 ❒ 1195 transformed into a survi v al format by dening RFS time as the time v ariable and survi v al e v ent as the censoring indicator . 2.3. Sur vi v al analysis This w ork implement SA that is a statistical approach used to analyze and interpret time-to-e v ent dat a, commonly applied in clinical and epidemiological studies. It focuses on estimat ing the probability of an e v ent occurring o v er time while accounting for censored observ ations. K e y components include the survi v al function, hazard function, and models such as Kapl an-Meier estimator and Cox proportional hazards re gression. These methods allo ws us to identify f actors inuencing survi v al time and assess dif ferences between groups. The SA is essentia l in longitudinal studies where the timing of e v ents is critical and traditional statistical met hod s may be inadequate. The anal ysis w orko w w as structured as follo ws: the dataset w as rst loaded and then the non-clini cal columns were e xcluded to reduce noise. The initial step in v olv ed uni v ariate analysis via the Kaplan–Meier plot, where users can partition the dataset by cate gorical v ariables and visualize survi v al curv es along with median RFS for each subgroup. Subsequently , tw o parallel analytical procedures were e x ecuted: rank survi v al features [24] w as used to rank clinical v ariables based on uni v ariate Cox tests or multi v ariate log-rank tests and Cox proportional hazards [25] w as applied to model simultaneous ef fects of multiple clinical v ariables on RFS. The Cox model w as implemented using all independent v ariables concurrently (multi v ariate analysi s) to estimate the hazard ratio (HR ) for each co v ariate. In addition, feature ranking w as conducted using both the Cox log-lik elihood ratio test (uni v ariate) and the multi v ariate log-rank test. These rankings generated a prioritized list of statistically signicant features contrib uting to RFS outcomes. The interpretation of the results w as conducted using both p-v alues and ef fect sizes to ensure a comprehensi v e understanding of the statistical signicance and practical rele v ance of the ndings. p-v alues were utilized to determine whether the observ ed a ssociations or dif ferences were statistically signicant, typically e v aluated ag ainst a predened threshold (e.g., p < 0.05). Ho we v er , recognizing that statistical signicance alone does not imply meaningful impact, ef fect sizes were also calculated to quantify the magnit ud e of the observ ed ef fects. This dual approach enabled a more nuanced interpretation, balancing statistical rigor wi th the real-w orld implications of the results across the v ariables e xamined. 3. RESUL TS AND DISCUSSION This section presents the results of the SA conducted using the MET ABRIC dataset through the Orange3 data mining platform. The analysis aimed to identify clinical v ariables signicantly as sociated with RFS in patients with breast cancer . A total of 1,904 patient records were processed, and six clinical v ariables were in v estig ated: tumor grade, lymph nodes e xamined positi v e, chemotherap y , radiotherap y , age at diagnosis, and tumor size. 3.1. Kaplan–Meier sur vi v al estimates Kaplan–Meier survi v al curv es were generated to e xamine the RFS probability across stratied groups for each clinical v ariable. Each curv e represents the survi v al function o v er time, and the dif ferences between groups were statistically tes ted using the log-rank test. These curv es pro vide visual and statistical insights into the heterogeneity of clinical outcomes based on k e y patient characteristics and therapeutic interv entions. Figure 1 s h o ws Kaplan–Meier curv es of RFS stratied by tumor size. P atients with the small est primary tumors ( < 19.5 mm, blue curv e) e xhibit substantially higher survi v al than those with intermediate or lar ge tumors. In particular , the blue curv e (small tumors) has a median RFS of 199.1 months, whereas the green curv e (tumors ≥ 26.5 mm) has a median of only 86.6 mont hs. The condence bands (shaded re gions) indicate minimal o v erlap between the e xtreme groups. F or e xample, by 150 months only about 30% of the lar ge-tumor group remain relapse-free, compared to roughly 60% of the small-tumor group. The log-rank test yields p < 0.005, conrming that these dif ferences are highly signicant. Notably , all curv es decline from near 100% survi v al at time zero, b ut the lar ge-tumor curv e drops much more steeply during early follo w-up, indicating earlier relapses in that group. Throughout the follo w-up, the separation persists: at 100 months roughly 50% of the small-tumor patients remain e v ent-free, whereas the majority of patients with lar ge tumors ha v e already relapsed. These observ ations demonstrat e that increasing tumor size is strongly associated with higher hazard of relapse in this cohort. T umor size thus emer ges as a po werful prognostic f actor , since e v en Mapping signicant clinical factor s to r elapse-fr ee survival pr o gnosis in br east cancer ... (Boby Al Qurthuby) Evaluation Warning : The document was created with Spire.PDF for Python.
1196 ❒ ISSN: 2252-8814 the moderate-sized group (red curv e) lies between the e xtremes in both median survi v al (148.1 months) and curv e trajectory . Figure 1. Kaplan-Meier curv es of RFS stratied by tumor size Figure 2 presents Kaplan–Meier curv es stratied by age at diagnosis. P atients diagnosed at a younger age ( < 55.6 years, blue curv e) ha v e mark edly better survi v al than older patients ( ≥ 67.9 years, green curv e), with the middle-age group (55.6–67.9 years, red) in between. The median RFS is 246.2 months for the youngest group and only 101.6 months for the oldest group. The condence interv als for the youngest and oldest groups barely o v erlap, and the log-rank test yields p < 0.005. This indicates a highly signicant trend to w ard w orse outcomes with increasing age. Earl y in follo w-up, the dif ference is already apparent: at 80 months about 60% of the youngest group are still relapse-free compared to roughly 40% of the oldest group. By 150 months the survi v al g ap has widened further . The consistent ordering and parallel decline of the curv es suggest that the HR for age remains roughly constant o v er time (no crossing of curv es). These results imply that older age at diagnosis confers a substantially higher relapse risk. In practical terms, younger patients in this dataset enjo y signicantly longer RFS. This trend may reect age-rel ated dif ferences in tumor biology and patient resilience, b ut re g ardless of cause, age is clearly an important prognostic co v ariate in the MET ABRIC cohort. Figure 3 sho ws RFS stratied by chemotherap y status. In this case, patients who recei v ed chemotherap y (red curv e) ha v e w orse survi v al than those who did not (blue curv e). The median RFS for the chemotherap y group is 102.7 months, compared to 145.0 months for the no-chemotherap y group. The condence bands o v erlap some what, and the log-rank test yields p = 0.03, i ndicating a statistically signicant (albeit weak er) dif ference. Notably , at early times (e.g. 50 months) the no-chemotherap y curv e is around 90% survi v al v ersus about 80% for the chemotherap y curv e. Ov er the rst 100 months the g ap persists such that by 100 months roughly 70% of the no-chemotherap y patients are e v ent-free compared to only 50% of the chemotherap y group. Be yond 150 months the curv es tend to con v er ge due to small numbers. These ndings suggest that patients who recei v ed chemotherap y had a higher hazard of relapse. Ho we v er , this result lik ely reects confounding by indication: patients selected for chemotherap y often had more aggressi v e tumor features at baseline. W ithout adjustment, the Kaplan–Meier plot cannot distinguish between a true harmful ef fect of chemotherap y and the f act that the chemo group w as inherently higher -risk. Therefore, while the Int J Adv Appl Sci, V ol. 15, No. 3, September 2026: 1193–1202 Evaluation Warning : The document was created with Spire.PDF for Python.
Int J Adv Appl Sci ISSN: 2252-8814 ❒ 1197 log-rank test indicates a signicant survi v al dif ference (p = 0.03), this should not be interpreted as e vidence that chemotherap y reduces survi v al; rather , it highlights the cli nical reality that treated patients in this sample f ared w orse on a v erage, presumably due to more adv anced disease. Figure 2. Kaplan-Meier curv es stratied by age at diagnosis Figure 3. Kaplan-Meier chemotherap y status Mapping signicant clinical factor s to r elapse-fr ee survival pr o gnosis in br east cancer ... (Boby Al Qurthuby) Evaluation Warning : The document was created with Spire.PDF for Python.
1198 ❒ ISSN: 2252-8814 Figure 4 demonstrate that patients with < 0.5 positi v e lymph nodes had the highest median RFS, reaching 171.9 months, whereas pa tients with ≥ 2.5 positi v e lymph nodes e xhibited the lo west median RFS of 64.2 months. This dif ference w as statistically signicant (p < 0.005), pro viding further e vidence that the e xtent of lymph node in v olv ement is strongly associated with the risk of disease recurrence. An increasing number of posit i v e lymph nodes w as as sociated with a progressi v ely poorer prognosis, as greater lymphatic in v olv ement may indicate more e xtensi v e dissemination of malignant cells and a higher lik elihood of systemic metastasis. Consequently , patients in the group with ≥ 2.5 positi v e lymph nodes demonstrated substantially shorter RFS and may represent a subgroup with a higher risk of recurrence requiring closer clinical surv eillance and potentially more intensi v e therapeutic management. Figure 4. Kaplan-Meier lymph nodes Figure 5 compares RFS between patients who did (red curv e) v ersus did not (blue curv e) recei v e postoperati v e radiotherap y . The radiotherap y group has a noticeably better survi v al curv e, with a median RFS of 153.7 months v ersus 119.1 months in the no-radiotherap y group. The shaded condence interv als for the tw o groups remain lar gely separated after the rst 50 months of follo w-up. The log-rank test yields p < 0.005, indicating a statistically signicant dif ference. F or e xample, at 100 months approximately 60% of patients who recei v ed radiotherap y are still relapse-free, whereas only about 50% of patients without radiotherap y remain e v ent-free. This pattern implies a protecti v e ef fect of radiotherap y–patients who recei v ed radiation ha v e consistently lo wer hazard of relapse. In f act, by 200 months the majority of the radiotherap y group remain e v ent-free, whereas the non-radiotherap y group has declined to a much smaller survi v al fraction. In summary , the Kaplan–Meier analysis suggests that radiotherap y is associated with an appreciable impro v ement in RFS in this cohort. Figure 6 sho ws Kaplan–Meier curv es by histological tumor grade (1, 2, or 3). Lo wer -grade tumors (blue curv e, grade 1) are associated with the best survi v al: median RFS is 195.1 months for grade 1. In contrast, high-grade tumors (green curv e, grade 3) ha v e a median of on l y 115.8 months. Grade 2 (red) is intermediate at 152.5 months. The curv es are well separated, and the log-rank test gi v es p < 0.005. Early on (up to 50 months) o v er 90% of grade 1 patients remain e v ent-free v ersus about 80% of grade 3. By 150 months, only 20% of grade 3 patients are relapse-free compared to 50% of grade 1. The shaded condence re gions sho w Int J Adv Appl Sci, V ol. 15, No. 3, September 2026: 1193–1202 Evaluation Warning : The document was created with Spire.PDF for Python.
Int J Adv Appl Sci ISSN: 2252-8814 ❒ 1199 limited o v erlap among the grades. These patterns reect the e xpected biology: higher -grade tumors are more aggressi v e and recur earlier . The sizable dif ferences in median survi v al (nearly 80 months between grade 1 and grade 3) indicate that tumor grade is a signicant determinant of prognosis in this cohort. Figure 5. Kaplan-Meier curv es postoperati v e radiotherap y Figure 6. Kaplan–Meier curv es by histological tumor grade Mapping signicant clinical factor s to r elapse-fr ee survival pr o gnosis in br east cancer ... (Boby Al Qurthuby) Evaluation Warning : The document was created with Spire.PDF for Python.
1200 ❒ ISSN: 2252-8814 In identifying feature ranking based on Cox log-lik elihood ratio test, each v ariable is assessed by ho w much it impro v es the model’ s t, with lar ger v alues indicating greater importance, as e xplicated in T able 1. Age at diagnosis is rank ed rst (log-lik elihood ratio (LLR) 130.4, p = 3.31 × 10 − 30 , f alse disco v ery rate (FDR) 1.98 × 10 − 29 ), follo wed by number of positi v e lymph nodes (102.9, p = 3.45 × 10 − 24 , FDR 1.03 × 10 − 23 ) and tumor size (98.8, p = 2.78 × 10 − 23 , FDR 5.55 × 10 − 23 ). These three ha v e e xtremely high signicance–their FDR-corrected p-v alues remain < 10 − 22 – reecting that the y dominate the survi v al model. T umor grade is fourth (LLR-meaning the recurrence of cancer within the breast and surrounding areas after initia l treatment - 22.7, p = 1.92 × 10 − 6 , FDR ≈ 2.89 × 10 − 5 ), a much smaller b ut still signicant contrib ution. Radiotherap y (LLR 9.71, p = 0.002, FDR 0.002) and chemotherap y (LLR 4.546, p = 0.033, FDR 0.033) ha v e t he lo west scores. These correspond to weak er prognostic information in a uni v ariate sense. The drop from LLR ∼ 100 for the top features to < 10 for treatments is notable: it indicates that age, nodal status, and tumor b urden e xplain most of the v ariability in outcome. In ef fect, age alone accounts for a 130-point increase in log-lik elihood–an enormous ef fect (by comparison, a lik elihood ratio of 3.84 corresponds to p = 0.05 for one de gree of freedom). The chemotherap y v ariable’ s LLR of only ∼ 4.55 suggests a mar ginal uni v ariate ef fect (just under p = 0.05). The FDR column conrms that e v en after correcting for multiple tests, all six f actors are statistically signicant (the lar gest FDR being 0.033 for chemotherap y). Thus, the ranking reinforces the Cox re gression and Kaplan–Meier results: patient age, lymph node in v olv ement, and tumor size carry the greatest prognostic weight, while tumor grade is moderately important and treatment v ariables, though statistically rele v ant, contrib ute less to prediction. T able 1. Rank survi v al features Features Log-lik elihood ratio test p FDR Age at diagnosis [years] 130.4 3.31x10 − 30 1.98x10 − 29 L ymph nodes e xamined positi v e 102.9 3.45x10 − 24 1.03x10 − 23 T umor size [mm] 98.8 2.78x10 − 23 5.55x10 − 23 T umor grade 22.7 1.92x10 − 6 2.89x10 − 23 Radiotherap y 9.713 0.002 0.002 Chemotherap y 4.546 0.033 0.033 4. CONCLUSION This comprehensi v e SA reinforces the critical role of traditional clinical f actors—age, tumor size, lymph node in v olv ement, and tumor grade—as signicant predictors of RFS in breast cancer patients. Findings from Kaplan–Meier curv es and Cox proportional hazards models conrm and quantify their prognostic rele v ance, while rare histological subtypes and adjuv ant radiotherap y sho w strong protecti v e associations. The observ ed correlation between chemotherap y and reduced RFS highlights the impact of clinical selection bias and cautions ag ainst o v erinterpretation of observ ational outcomes. Clinically , these insights aid in precise risk stratication, enabling more t ailored treatment decisions. Ho we v er , this retrospecti v e analysis has inherent limitations, such as the absence of molecular biomark ers and genetic data. Thus, while the study pro vides rob ust v alidation of established kno wledge, future research inte grating multi-omics data and adv anced modeling techniques is essential to rene predicti v e accurac y and unra v el the comple xity of breast cancer prognosis. A CKNO WLEDGMENTS This w ork has been supported by the Master of Informat ics, F aculty of Articial Intelligence and Data Science, Uni v ersitas Pelita Harapan, Jakarta, Indonesia. FUNDING INFORMA TION Authors state no funding in v olv ed. A UTHOR CONTRIB UTIONS ST A TEMENT This journal uses the Contrib utor Roles T axonomy (CRediT) to recognize indi vidual author contrib utions, reduce authorship disputes, and f acilitate collaboration. Int J Adv Appl Sci, V ol. 15, No. 3, September 2026: 1193–1202 Evaluation Warning : The document was created with Spire.PDF for Python.
Int J Adv Appl Sci ISSN: 2252-8814 ❒ 1201 Name of A uthor C M So V a F o I R D O E V i Su P Fu Boby Al Qurthuby ✓ ✓ ✓ ✓ ✓ ✓ ✓ I Made Murw antara ✓ ✓ ✓ ✓ ✓ ✓ ✓ ✓ ✓ ✓ ✓ C : C onceptualization I : I n v estig ation V i : V i sualization M : M ethodology R : R esources Su : Su pervision So : So ftw are D : D ata Curation P : P roject Administration V a : V a lidation O : Writing - O riginal Draft Fu : Fu nding Acquisition F o : F o rmal Analysis E : Writing - Re vie w & E diting CONFLICT OF INTEREST ST A TEMENT Authors state no conict of interest. INFORMED CONSENT This section not applicable. This study did not in v olv e human participants, human data, or an y personally identiable informati on. All data used were either publicly a v ail able, fully anon ymized, or deri v ed from non-human sources, and therefore no informed consent w as required from indi viduals. ETHICAL APPR O V AL This section applicable. This research did not in v olv e human subjects, human biological materi als, or e xperimental procedures on animals. The w ork w as conducted solely on computational models, publicly a v ailable datasets, or non-sensiti v e data that did not re q ui re interv ention with li ving or g anisms. Therefore, ethical appro v al from an institutional re vie w board or animal ethics committee w as not necessary for this study . D A T A A V AILABILITY The supporting data of this study are openly a v ailable in cBioPortal at https://www .cbioportal.or g/study/ summary?id=brca metabric. REFERENCES [1] P . K e and C. Li, “Space-time dynamic v ariation trend of female breast cancer incidence and mortality: a global perspecti v e (1990–2021), ” Cancer Epidemiolo gy , v ol. 98, Oct. 2025, doi: 10.1016/j.canep.2025.102898. [2] P . Sun et al ., “Global, re gional , and national b urden of female cancers in w omen of child-bearing age, 1990–2021: analysis of data from the global b urden of disease study 2021, ” eClinicalMedicine , v ol. 74, Aug. 2024, doi: 10.1016/j.eclinm.2024.102713. [3] J. P . A. -Granados and L. F . Ni ˜ no, “Prediction of o v erall and relapse-free survi v al in triple-ne g ati v e breast cancer patients through machine learning-based clustering on clinical data, ” Clinical Br east Cancer , v ol. 25, no. 7, pp. 714–719, Oct. 2025, doi: 10.1016/j.clbc.2025.07.027. [4] M. Ka w ase et al ., “Impact of D3 lymph node dissection on short-term and long-term outcomes in elderly patients with colon cancer , ” T ec hniques in Colopr octolo gy , v ol. 29, no. 1, Dec. 2025, doi: 10.1007/s10151-025-03149-9. [5] L. F allo weld, B. E. Kiely , L. T ra v ado, R. V entura, J. Dullehan, and F . Cardoso, “Best practices for communication of prognosis and end-of-life discussions with patients with adv anced breast cancer: a report from the adv anced breast cancer global alliance, ” The Br east , v ol. 84, Dec. 2025, doi: 10.1016/j.breast.2025.104595. [6] O. Y ersal, “Biological subtypes of breast cancer: prognostic and therapeutic implications, ” W orld J ournal of Clinical Oncolo gy , v ol. 5, no. 3, 2014, doi: 10.5306/wjco.v5.i3.412. [7] E. M. Y ousef et al ., “Incidence and prognostic signicance of hormonal receptors and HER2 status con v ersion in recurrent breast cancer: a retrospecti v e study in a single institute, ” Medicina , v ol. 61, no. 4, Mar . 2025, doi: 10.3390/medicina61040563. [8] E. Nolan, G. J. Lindeman, and J. E. V isv ader , “Deciphering breast cancer: from biology to the clinic, ” Cell , v ol. 186, no. 8, pp. 1708–1728, Apr . 2023, doi: 10.1016/j.cell.2023.01.040. [9] Y . Chen, Z. Xu, Y . Chen, Y . Dai, and J. Ding, “Comparison of the prognosis of medullary breast carcinoma and in v asi v e ductal carcinoma: a SEER-based study , ” T r anslational Cancer Resear c h , v ol. 13, no. 1, pp. 231–248, Jan. 2024, doi: 10.21037/tcr -23-858. [10] D. Jiao et al ., “Impact of hormone receptor status and HER2 e xpression on neoadjuv ant tar geted therap y response in HER2-positi v e breast cancer: a multicenter retrospecti v e study , ” Modern P atholo gy , v ol. 38, no. 8, Aug. 2025, doi: 10.1016/j.modpat.2025.100778. [11] G. Gaggi et al ., “Interference of estrogen signaling by endocrine disruptors in male and female cells: potential implications of BPS and PFOS in human de v elopment, ” Eur opean J ournal of Cell Biolo gy , v ol. 104, no. 3, Sep. 2025, doi: 10.1016/j.ejcb .2025.151509. [12] C. Niu, R. Zhang, C. Zhang, C. Liu, and Z. W u, “Progesterone attenuates depression-lik e beha viors in chr onic unpredictable stress via suppression of neuroinammation, ” Behaviour al Br ain Resear c h , v ol. 497, Feb . 2026, doi: 10.1016/j.bbr .2025.115879. Mapping signicant clinical factor s to r elapse-fr ee survival pr o gnosis in br east cancer ... (Boby Al Qurthuby) Evaluation Warning : The document was created with Spire.PDF for Python.
1202 ❒ ISSN: 2252-8814 [13] A. Lindholm et al. , “Pro-inammatory c ytokines increase temporarily after adjuv ant treatment for breast cancer in postmenopausal w omen: a longitudinal study , ” Br east Cancer Resear c h , v ol. 26, no. 1, Oct. 2024, doi: 10.1186/s13058-024-01898-3. [14] W . Cui, M. F an, and L. Li, “Morphological analysis of tumor microen vironment in HER2-positi v e breast cancer: predicting response to neoadjuv ant chemotherap y on histopathological images, ” Br east Cancer Resear c h , v ol. 27, no. 1, Oct. 2025, doi: 10.1186/s13058-025-02139-x. [15] S . Lighto wlers, S. Raby , and R. Chuter , “ A national frame w ork for mo ving to w ards more en vironmentally sustainable radiotherap y: the green radiotherap y frame w ork, ” Radiother apy and Oncolo gy , v ol. 212, No v . 2025, doi: 10.1016/j.radonc.2025.111114. [16] F . Girardi et al ., “Omitting anthrac yclines for the adjuv ant treatment of patients with triple-ne g ati v e breast cancer: a non-inferiority meta-analysis, ” The Br east , v ol. 83, Oct. 2025, doi: 10.1016/j.breast.2025.104524. [17] D . V aliya v eettil, D. Joseph, and M. Malik, “Cardiotoxicity in breast cancer treatment: causes and mitig ation, ” Cancer T r eatment and Resear c h Communications , v ol. 37, 2023, doi: 10.1016/j.ctarc.2023.100760. [18] J. Greene and B. Hennessy , “The role of anthrac yclines in the treatment of early breast cancer , ” J ournal of Oncolo gy Pharmacy Pr actice , v ol. 21, no. 3, pp. 201–212, Jun. 2015, doi: 10.1177/1078155214531513. [19] S. T . -Bayona et al ., “Radiotherap y v ersus observ ation after sur gical resection of atypical meningiomas, ” Inter disciplinary Neur osur g ery , v ol. 25, Sep. 2021, doi: 10.1016/j.inat.2021.101201. [20] C. Curtis et al ., “The genomic and transcri ptomic architecture of 2,000 breast tumours re v eals no v el subgroups, ” Natur e , v ol. 486, pp. 346–352, Jun. 2012, doi: 10.1038/nature10983. [21] B. Pereira et al ., “The somatic mutation proles of 2,433 breast cancers rene their genomic and transcriptomic landscapes, ” Natur e Communications , v ol. 7, no. 1, May 2016, doi: 10.1038/ncomms11479. [22] O. M. Rueda et al ., “Dynamics of breast-cancer relapse re v eal late-recurring ER-positi v e genomic subgroups, ” Natur e , v ol. 567, pp. 399–404, Mar . 2019, doi: 10.1038/s41586-019-1007-8. [23] M. I. Higgins et al ., “Molecular classication of nonurothelial histologic subtypes of bladder cancer , ” Ur olo gic Oncolo gy: Seminar s and Original In vestigations , v ol. 43, no. 11, pp. 599–608, No v . 2025, doi: 10.1016/j.urolonc.2025.07.025 [24] T . De y , A. Mukherjee, and S. Chakraborty , “ A practical o v ervie w and reporting strate gies for statisti cal analysis of survi v al studies, ” Chest , v ol. 158, no. 1, pp. S39–S48, Jul. 2020, doi: 10.1016/j.chest.2020.03.015. [25] V . Poon and D. Lu, “Performance of Cox proportional hazard models on reco v ering the ground truth of confounded e xposure–response relationships for lar ge-molecule oncology drugs, ” CPT : Pharmacometrics & Systems Pharmacolo gy , v ol. 11, no. 11, pp. 1511–1526, No v . 2022, doi: 10.1002/psp4.12859. BIOGRAPHIES OF A UTHORS Boby Al Qurthuby is a graduat e Informatics student, Uni v ersitas Pel ita Harapan, Indonesia. His skilled in fullstack de v elopment, data science, and cloud computing system. Strong education professional with a bachelor’ s de gree focused in Math, from Uni v ersitas Udayana, Indonesia. He can be contacted at email: 01679230016@student.uph.edu. I Made Murwantara earned his Ph.D. de gree in Computer Science from the Uni v ersity of Birmingham, United Kingdom in 2016. He currently teaches cloud computing, adv anced softw are engineering, fr ontier technology , softw are engine ering application design studio, and operations research at Uni v ersitas Pelita Harapan, Indonesia. His research interest includes softw are product line engineering for and in cloud computing, AI for biomedical analysis, AI-based softw are automation, and cloud computing ener gy management. He can be contacted at email: made.murw antara@uph.edu. Int J Adv Appl Sci, V ol. 15, No. 3, September 2026: 1193–1202 Evaluation Warning : The document was created with Spire.PDF for Python.