IAES
Inter
national
J
our
nal
of
Articial
Intelligence
(IJ-AI)
V
ol.
15,
No.
5,
October
2026,
pp.
4512
∼
4522
ISSN:
2252-8938,
DOI:
10.11591/ijai.v15.i5.pp4512-4522
❒
4512
Deep
multi-block
con
v
olutional
neural
netw
ork
f
or
quantitati
v
e
near
-infrar
ed
spectral
analysis
Hilmy
Abidzar
T
awakal
1,2
,
Y
ohanes
Aris
Purwanto
3
,
Sony
Hartono
W
ijaya
1
,
Shelvie
Nidya
Neyman
1
1
School
of
Data
Science,
Mathematics,
and
Informatics,
IPB
Uni
v
ersity
,
Bogor
,
Indonesia
2
Department
of
Informatics,
Nurul
Fikri
Colle
ge
of
T
echnology
,
Depok,
Indonesia
3
Di
vision
of
Biosystem
Engineering,
F
aculty
of
Engineering
and
T
echnology
,
IPB
Uni
v
ersity
,
Bogor
,
Indonesia
Article
Inf
o
Article
history:
Recei
v
ed
Jul
16,
2025
Re
vised
Jul
17,
2026
Accepted
Aug
12,
2026
K
eyw
ords:
Deep
learning
Multi-block
con
v
olutional
neural
netw
ork
Near
-infrared
spectra
Preprocessing
Rice
quality
Spectral
analysis
ABSTRA
CT
Near
-infrared
(NIR)
spectroscop
y
is
a
po
werful
analytical
technique,
b
ut
its
ef
fecti
v
eness
is
often
hi
ndered
by
inst
rumental
noise
and
a
depe
ndenc
y
on
e
xpert-dri
v
en
preprocessing
and
calibration.
This
study
introduces
a
no
v
el,
intelligent
deep
learning
architecture,
a
deep
multi-block
con
v
olutional
neural
netw
ork
(CNN)
that
addresses
these
challenges
by
performing
end-to-end
quantitati
v
e
analysis
directly
on
ra
w
spectral
data.
By
se
gmenti
ng
the
NIR
spectrum
into
multiple
blocks
and
processing
them
in
parallel,
the
model
mimics
multi-scale
feature
learning,
automatically
identifying
and
le
v
eraging
localized
spectral
re
gions
rele
v
ant
to
tar
get
properties.
This
approach
eliminates
the
need
for
manual
preprocessing,
a
signicant
step
to
w
ard
creating
autonomous
analytical
systems.
This
st
udy
e
v
aluated
the
model
on
four
rice
quality
datasets
(moisture,
protein,
f
atty
acids,
and
total
f
at)
and
benchmark
ed
it
ag
ainst
traditional
partial
least
squares
re
gression
(PLSR)
and
other
deep
learning
models.
The
proposed
multi-block
CNN
consistently
achie
v
ed
superior
performance,
demonstrating
its
ability
to
handle
ra
w
spectral
data
rob
ustly
.
F
or
instance
,
it
achie
v
ed
coef
cient
of
determination
(
R
2
)
v
alues
of
0
.
996
±
0
.
003
for
total
f
at
and
0
.
997
±
0
.
001
for
f
atty
acids.
Statistical
tests
conrm
that
the
model’
s
performance
on
ra
w
data
is
not
signicantly
dif
ferent
from
its
performance
wit
h
optimized
preprocessing,
v
alidating
its
potential
for
real-w
orld
articial
intelligence
applications
in
agriculture,
food
quality
monitoring,
and
biosystems
engineering
where
rapid,
automated
analysis
is
critical.
This
is
an
open
access
article
under
the
CC
BY
-SA
license
.
Corresponding
A
uthor:
Y
ohanes
Aris
Purw
anto
Di
vision
of
Biosystem
Engineering,
F
aculty
of
Agricultural
T
echnology
,
IPB
Uni
v
ersity
Bogor
,
Indonesia
Email:
arispurw
anto@apps.ipb
.ac.id
1.
INTR
ODUCTION
Near
-infrared
(NIR)
spectroscop
y
of
fers
rapid,
non-destructi
v
e,
and
safe
chemical
analysis,
making
it
in
v
aluable
in
elds
lik
e
agriculture
and
food
science
[1]–[3].
Ho
we
v
er
,
ra
w
NIR
spectra
are
frequently
corrupted
by
noise,
baseline
drift,
and
light
scattering
ef
fects,
which
can
obscure
the
underlying
chemical
information
[4].
T
raditionally
,
this
chall
enge
is
addressed
through
a
multi-step
pipeline
that
in
v
olv
es
e
xpert-dri
v
en
preprocessing
techniques
follo
wed
by
the
construction
of
a
calibration
model,
typically
using
methods
s
uch
as
parti
al
least
squares
re
gression
(PLSR).
The
success
of
this
pipeline
is
highly
dependent
on
human
e
xpertise,
and
an
inappropriate
choice
of
preprocessing
can
e
v
en
de
grade
model
performance
more
than
J
ournal
homepage:
http://ijai.iaescor
e
.com
Evaluation Warning : The document was created with Spire.PDF for Python.
Int
J
Artif
Intell
ISSN:
2252-8938
❒
4513
using
no
preprocessing
at
all
[5].
Deep
learning
has
emer
ged
as
a
po
werful
alternati
v
e,
capable
of
learning
hierarchical
features
directl
y
from
data
and
thus
automating
the
feature
engineering
process
[6],
a
trend
that
has
been
e
xtensi
v
ely
re
vie
wed
in
recent
literature
[7].
This
has
led
to
a
recent
sur
ge
of
interest
in
the
eld,
alongside
a
critical
discussion
of
its
benets
and
potential
pitf
alls
[8].
Studies
ha
v
e
sho
wn
that
con
v
olutional
neural
netw
ork
(CNN)
can
ef
fecti
v
ely
replace
traditional
preprocessing
steps
and
achie
v
e
promising
results
in
NIR
spectral
analysis
[9].
Se
v
eral
researchers
ha
v
e
successfully
de
v
eloped
CNN
architectures
for
NIR
data
that
perform
better
on
ra
w
spectra
than
on
preprocessed
data
[5],
[10]–[13].
Ho
we
v
er
,
an
important
research
g
ap
remains:
e
xisting
CNN-based
spectral
models
often
treat
the
spectrum
as
a
monolithi
c
whole
and
f
ail
to
capture
localized
spectral
rele
v
ance
ef
fecti
v
ely
,
e
v
en
though
chemical
information
in
NIR
spectra
is
not
uniformly
distrib
uted.
Specic
or
g
anic
compounds
correlate
strongly
with
narro
w
,
distinct
w
a
v
elength
re
gions,
while
other
re
gions
may
contain
only
noise.
T
o
address
this
g
ap,
this
study
proposes
a
no
v
el
deep
multi-block
CNN
architecture
that
se
gments
the
NIR
spectrum
and
learns
localized
features
in
parallel,
b
uilding
on
recent
adv
ancements
in
parallel
input
models
for
spectral
analysis
[14].
Inspired
by
the
inception
layer
concept
and
attention
mechanisms
[15],
the
architecture
functions
as
an
intelligent
system
that
autonomously
identies
and
weighs
the
importance
of
dif
ferent
spectral
re
gions.
This
study’
s
primary
objecti
v
e
is
to
de
v
elop
and
v
alidate
a
preprocessing-free,
end-to-end
CNN
architec
ture
for
rob
ust
NIR
spe
ctral
re
gression.
Thi
s
study
h
ypothesizes
that
by
enabling
the
model
to
focus
on
localized
spectral
se
gments,
it
can
enhance
its
ability
to
e
xtract
meaningful
features,
reduce
the
impact
of
noise,
and
b
uild
more
accurate
and
generalizable
calibration
models
directly
from
ra
w
data.
This
w
ork
adv
ances
intelligent
systems
by
demonstrating
ho
w
a
modular
,
block-based
architecture
can
enable
automated
learning
directly
from
ra
w
sensor
data,
highlighting
its
potential
for
real-w
orld
articial
intelligence
applications
in
quality
control
and
process
monitoring.
2.
MA
TERIALS
AND
METHODS
2.1.
Materials
This
study
used
NIR
spectra
of
rice
to
estim
ate
essential
properties:
moisture,
protein,
f
atty
aci
ds,
and
total
f
at,
which
are
k
e
y
indicators
of
rice
quality
[16]–[18].
Rice
samples
are
placed
in
a
glass
container
and
sealed
with
dark
paper
to
minimize
en
vironmental
interference,
such
as
ambient
light,
during
measurement.
Rice
samples
were
stored
in
a
container
and
measured
monthly
o
v
er
a
5-month
period.
NIR
spectra
were
collected
using
a
spectrometer
with
a
w
a
v
elength
range
of
1,350
to
2,500
nm,
resulting
in
257
spectral
features
per
sample.
F
or
calibration,
reference
v
alues
for
rice
properties
were
obtained
from
certied
laboratories.
2.2.
Methods
2.2.1.
Pr
epr
ocessing
methods
T
o
establish
a
performance
benchmark,
this
study
compared
models
trained
on
ra
w
data
with
those
trained
on
data
preprocessed
with
v
arious
con
v
entional
techniques,
including
scatter
correction
(standard
normal
v
ariate
(SNV),
multiplicati
v
e
scatter
correction
(MSC),
e
xtended
multiplicati
v
e
scatter
correction
(EMSC)),
asymmetric
least
squares
baseline
correction
(ALS),
and
smoothing
(Sa
vitzk
y-Golay).
These
methods
address
common
issues
in
NIR
s
pectra,
such
as
baseline
drift,
noise,
and
scattering
ef
fects.
The
y
were
selected
based
on
prior
research
demonstrating
their
ef
fecti
v
eness
[19]–[21].
2.2.2.
Baseline
calibration
models
T
o
e
v
aluate
the
proposed
method,
this
study
benchmark
ed
its
performance
ag
ainst
a
di
v
erse
set
of
traditional
and
deep
learning-based
models.
This
study
included
PLSR
as
a
representati
v
e
of
the
standard
linear
chemometric
methods
widely
used
in
spect
ral
data
analysis.
T
o
pro
vide
a
rationale
for
using
more
comple
x
architectures,
tw
o
baseline
models
were
implemented:
a
simple
deep
neural
netw
ork
(DNN)
and
a
simple
CNN.
The
simple
DNN
consisted
of
tw
o
hidden
layers
with
64
neurons
each
using
rectied
linear
unit
(ReLU)
acti
v
ation,
designed
to
assess
performance
without
con
v
olutional
feature
e
xtraction.
The
simple
CNN
featured
a
Con
v1D
layer
with
64
lters
,
fol
lo
wed
by
MaxP
o
ol
ing1D,
a
se
cond
Con
v1D
l
ayer
with
128
lters,
and
a
nal
dense
output
layer
.
Finally
,
the
proposed
multi-block
architecture
w
as
compared
with
state-of-the-art
models
in
the
literature,
specically
DeepSpectra
[5]
and
spectral-visual
geometry
group
(SpectraV
GG)
[13],
which
represent
more
adv
anced,
deeper
CNN
architectures.
Deep
multi-bloc
k
con
volutional
neur
al
network
for
quantitative
near
-infr
ar
ed
...
(Hilmy
Abidzar
T
awakal)
Evaluation Warning : The document was created with Spire.PDF for Python.
4514
❒
ISSN:
2252-8938
2.2.3.
Pr
oposed
multi-block
con
v
olutional
neural
netw
ork
ar
chitectur
e
The
proposed
multi-block
CNN
is
an
intelligent
architecture
designed
for
end-to-end
analysis,
inte
grating
feature
e
xtraction
and
re
gression
to
operate
directly
on
ra
w
spectra.
The
design
in
this
study
is
inspired
by
the
ef
fecti
v
eness
of
parallel
processing
of
spectral
se
gments,
a
concept
that
has
pro
v
en
successful
in
recent
chemometric
models
[14].
As
illustrated
in
the
conceptual
diagram
in
Figure
1,
the
ar
chitecture’
s
logic
comprises
three
k
e
y
stages:
spectral
se
gmentation,
parallel
feature
e
xtraction,
and
feature
fusion
for
re
gression.
This
gure
sho
ws
the
o
w
from
ra
w
spectra
→
block
se
gmentation
→
parallel
CNN
blocks
→
concatenation
and
dense
layers
→
output.
i)
Block
se
gmentation
strate
gy:
the
input
spectrum
(1
×
257
v
ector)
is
rst
di
vided
into
B
contiguous,
non-o
v
erlapping
blocks
of
equal
width.
This
se
gmentation
allo
ws
the
model
to
learn
localized
features
in
parallel,
since
dif
ferent
spectral
re
gions
encode
distinct
chemical
information.
The
number
of
blocks,
B
,
is
a
k
e
y
h
yperparameter
determined
during
optimization.
ii)
P
arallel
CNN
feature
e
xtraction
blocks:
each
spectral
block
is
processed
in
parallel
by
an
identical
CNN
sub-netw
ork
designed
to
act
as
an
automated
feature
e
xtractor
for
its
assigned
re
gion.
Each
sub-net
w
ork
consists
of
a
1D
con
v
olutional
layer
with
a
ReLU
acti
v
ation
function,
follo
wed
by
a
MaxPooling1D
layer
to
reduce
dimensionality
.
This
is
follo
wed
by
a
second
1D
con
v
olutional
layer
with
ReLU
act
i
v
ation
and
an
A
v
eragePooling1D
layer
,
concluding
with
a
atten
layer
to
produce
the
block’
s
specic
fea
ture
v
ector
.
The
optimal
number
of
lters
and
k
ernel
sizes
for
these
con
v
olutional
layers
are
deter
mined
through
h
yperparameter
optimization.
iii)
Feature
fusion
and
re
gression:
the
attened
feature
v
ectors
from
all
B
blocks
are
concatenated
into
a
single,
comprehensi
v
e
feature
v
ector
.
This
v
ector
is
then
processed
by
a
deep,
dense
netw
ork
(compri
sing
multiple
fully
connected
layers
with
ReLU
acti
v
ation)
that
models
the
non-linear
relationship
between
the
spectral
features
and
the
tar
get
property
.
Batch
normalization
and
dropout
are
applied
to
enhance
generalization
before
the
nal
single-neuron
output
layer
.
Figure
1.
Conceptual
diagram
of
the
proposed
multi-block
CNN
architecture
2.2.4.
Intelligent
h
yper
parameter
optimization
and
training
T
o
autonomously
det
ermine
the
optimal
model
conguration,
this
study
emplo
yed
an
i
ntelligent
h
yperparameter
optimization
strate
gy
using
the
Optuna
frame
w
ork
[22].
This
automated
approach
is
a
practical
implementation
for
tuni
ng
deep
spectral
models,
as
detailed
in
recent
hands-on
tutorials
for
the
chemometrics
community
[23],
[24].
The
tree-structured
P
arzen
estimator
(TPE)
algorithm
w
as
used
to
ef
cient
ly
search
the
h
yperparameter
space
o
v
er
100
trials,
with
the
objecti
v
e
of
maximizing
the
v
alidation
coef
cient
of
determination
(
R
2
)
score.
The
search
space
w
as
dened
to
e
xplore
k
e
y
architectural
and
training
parameters,
including
the
number
of
blocks
(
B
∈
{
2
,
4
,
8
}
),
the
number
of
lters
in
con
v
olutional
layers
(
l
ay
er
s
∈
[16
,
64]
),
k
ernel
sizes
(
k
er
nel
∈
{
3
,
5
,
7
}
),
the
number
of
neurons
in
dense
layers
(
node
∈
[8
,
32]
),
the
dropout
rate
(
do
∈
[0
.
1
,
0
.
5]
),
and
the
learning
rate
(
l
r
∈
[10
−
4
,
10
−
2
]
).
The
optimal
h
yperparameters
for
the
multi-block
CNN
were
determined
using
Optuna,
yielding
B
=
8
blocks.
Each
block
consists
of
tw
o
con
v
olutional
layers:
the
rst
with
32
lters
(k
ernel
size
5)
and
the
second
with
16
lters
(k
ernel
size
5).
The
subsequent
dense
layers
contain
16,
8,
and
4
neurons,
respecti
v
ely
.
T
o
pre
v
ent
o
v
ertting,
a
dropout
rate
of
0.2
w
as
applied,
and
the
model
w
as
trained
with
a
learning
rate
of
0.001.
Int
J
Artif
Intell,
V
ol.
15,
No.
5,
October
2026:
4512–4522
Evaluation Warning : The document was created with Spire.PDF for Python.
Int
J
Artif
Intell
ISSN:
2252-8938
❒
4515
2.2.5.
Experimental
setup
and
e
v
aluation
T
o
ensure
rigorous
and
unbiased
performance
estimation,
we
discarded
the
traditional
train-test
spl
it
in
f
a
v
or
of
a
nested
cross-v
alidation
(Nested
CV)
protocol.
The
Nested
CV
consisted
of
an
outer
loop
(5
folds)
dedicated
strictly
to
nal
model
e
v
aluation
and
an
inner
loop
(3
folds)
dedicated
to
h
yperparameter
tuning.
This
guarantees
that
the
h
yperparameters
are
optimized
wi
thout
an
y
data
leakage
from
the
test
set.
All
reported
performance
metrics
represent
the
mean
±
standard
de
viation
(SD)
across
the
5
outer
test
folds.
Model
performance
w
as
e
v
aluated
using
six
k
e
y
metrics:
R
2
,
mean
absolute
error
(MAE),
mean
absolute
percentage
error
(MAPE),
cross-v
alidation
root
mean
squared
error
(
RMSE
cv
),
prediction
root
mean
squared
error
(
RMSE
p
),
rat
io
of
performance
to
de
viation
(RPD),
and
ratio
of
error
to
range
(RER).
The
RMSE
cv
is
calculated
during
the
inner
tuning
loop
to
rank
h
yperparameters,
whereas
RMSE
p
measures
the
true
generalization
error
on
the
held-out
outer
folds.
In
chemometrics,
an
RPD
>
3
is
generally
considered
acceptable
for
s
creening
purposes,
and
an
RPD
>
5
is
considered
suit
able
for
quality
control.
T
o
ensure
methodological
transparenc
y
and
f
acilitate
reproducibility
,
all
e
xperimental
code,
h
yperparameter
search
spaces,
and
model
weights
ha
v
e
been
documented.
Importantly
,
the
test
set
in
the
outer
loop
of
the
nested
cross-v
alidation
w
as
strictly
held
out
and
completely
isolated
from
the
h
yperparameter
search
process.
Scripts
for
reproducing
the
results
and
generating
synthetic
data
schemas
(to
protect
proprietary
datasets)
are
a
v
ailable
upon
request.
3.
RESUL
TS
AND
DISCUSSION
3.1.
Model
perf
ormance
on
raw
spectra
First,
this
study
e
v
aluated
all
models
on
ra
w
spectral
data
to
establish
a
baseline
for
their
intri
nsic
learning
capabilities
without
manual
feature
engineering.
As
sho
wn
in
the
heatmap
in
Figure
2,
the
proposed
multi-block
CNN
achie
v
ed
the
highest
R
2
scores
across
all
four
tar
get
properties.
This
gure
demonstrates
the
superior
performance
of
the
multi-block
CNN
on
ra
w
spectral
data.
This
result
highlights
its
po
werful,
b
uilt-in
ability
to
e
xtract
meaningful
features
directly
from
unprocessed
data.
In
contrast,
the
simple
DNN
performed
the
w
orst,
conrming
that
con
v
olutional
layers
are
essential
for
ef
fecti
v
e
feature
e
xtraction
from
1D
spectral
data.
While
the
simple
CNN
and
more
comple
x
architectures
li
k
e
DeepSpectra
and
SpectraV
GG
performed
well,
the
y
were
consistently
outperformed
by
our
multi-block
approach,
underscoring
its
g
ains.
Figure
2.
Heatmap
of
mean
R
2
v
alues
for
each
model
without
an
y
preprocessing
3.2.
Impact
of
pr
epr
ocessing
Ne
xt,
this
study
e
v
aluated
each
model
using
its
optimal
preprocessing
method,
identied
through
e
xhausti
v
e
testing.
T
able
1
summarizes
both
the
selected
best
preprocessing
method
and
the
resulting
mean
R
2
±
SD
for
each
tar
get.
The
multi-block
CNN,
when
combined
with
its
optimal
preprocessing,
ag
ain
outperformed
all
other
models
and
sho
wed
lo
w
v
ariability
.
More
importantly
,
its
performance
on
ra
w
data
(MultiBlock
RA
W)
remained
superior
to
all
other
models,
e
v
en
when
the
y
used
their
optimal
preprocessing.
Deep
multi-bloc
k
con
volutional
neur
al
network
for
quantitative
near
-infr
ar
ed
...
(Hilmy
Abidzar
T
awakal)
Evaluation Warning : The document was created with Spire.PDF for Python.
4516
❒
ISSN:
2252-8938
T
able
1.
Summary
of
optimal
preprocessing
and
corresponding
mean
R
2
±
SD
for
each
model
and
dataset
Method
T
otal
f
at
F
atty
acid
Moisture
Protein
PLSR
0
.
655
±
0
.
046
[SG]
0
.
940
±
0
.
059
[SG]
0
.
754
±
0
.
040
[SG]
0
.
715
±
0
.
055
[SG]
DNN
0
.
966
±
0
.
010
[Cmb]
0
.
963
±
0
.
008
[Cmb]
0
.
940
±
0
.
043
[Cmb]
0
.
854
±
0
.
024
[Cmb]
CNN
0
.
964
±
0
.
008
[MMS]
0
.
959
±
0
.
011
[MMS]
0
.
940
±
0
.
038
[MMS]
0
.
862
±
0
.
031
[MMS]
DeepSpectra
0
.
948
±
0
.
012
[AS]
0
.
954
±
0
.
010
[Cmb]
0
.
905
±
0
.
030
[SG]
0
.
857
±
0
.
033
[SG]
SpectraV
GG
0
.
983
±
0
.
007
[MMS]
0
.
978
±
0
.
009
[MMS]
0
.
966
±
0
.
025
[MMS]
0
.
896
±
0
.
023
[SS]
MultiBlock
RA
W
0
.
995
±
0
.
004
[Ra
w]
0
.
997
±
0
.
001
[Ra
w]
0
.
991
±
0
.
014
[Ra
w]
0
.
939
±
0
.
019
[Ra
w]
MultiBlock
0
.
996
±
0
.
003
[AS]
0
.
997
±
0
.
001
[Cmb]
0
.
991
±
0
.
014
[Ra
w]
0
.
941
±
0
.
017
[AS]
SG:
Sa
vitzk
y-Golay
,
Cmb:
combination,
MMS:
min-max
scaling,
AS:
auto
scaling,
SS:
standard
scaling
3.3.
Deep
di
v
e
into
multi-block
con
v
olutional
neural
netw
ork
perf
ormance
3.3.1.
Nested
cr
oss-v
alidation
perf
ormance
T
able
2
presents
the
rigorous
nested
cross-v
alidation
results
for
the
optimal
multi-block
CNN
across
all
four
tar
get
properties.
The
model
demonstrated
e
xceptional
predicti
v
e
accurac
y
.
The
reported
v
alues
represent
the
mean
and
SD
across
the
v
e
outer
folds
of
the
nested
cross-v
alidation
procedure.
The
95%
condence
interv
als
(CI)
were
computed
using
the
Student’
s
t-distrib
ution
with
four
de
grees
of
freedom
(
t
0
.
975
,
4
=
2
.
776
),
according
to
CI
=
t
·
SD
√
n
,
where
n
=
5
denotes
the
number
of
outer
folds.
The
relati
v
ely
narro
w
CI,
particularly
for
total
f
at
and
f
atty
acid
prediction,
indicate
stable
generalization
performance
across
folds
and
conrm
the
rob
ustness
of
the
proposed
multi-block
CNN
under
strict
test-set
isolation.
From
an
application
perspecti
v
e,
the
model
achie
v
ed
RPD
scores
ranging
from
4
.
18
(protein)
to
22
.
02
(f
atty
acid).
According
to
standard
industry
thresholds,
an
RPD
>
5
indicates
that
the
model
is
highly
suitable
for
strict
quality
control,
while
an
RPD
>
3
is
e
xcellent
for
screening.
Therefore,
the
proposed
multi-block
CNN
is
fully
capable
of
replacing
m
anual
chemical
assays
for
rigorous
postharv
est
rice
e
v
aluation.
T
able
2.
Nested
cross-v
alidation
performance
of
the
proposed
multi-block
CNN
(mean
±
SD;
95%
CI
sho
wn
in
brack
ets)
T
ar
get
R
2
(Mean
±
SD)
RMSEcv
RMSEp
RPD
RER
T
otal
f
at
0.9954
±
0.0038
0.0858
±
0.0139
0.0191
±
0.0075
17.35
±
5.23
45.94
±
13.89
95%
CI
[
±
0.0047]
[
±
0.0172]
[
±
0.0093]
[
±
6.50]
[
±
17.24]
F
atty
acid
0.9974
±
0.0013
0.0133
±
0.0020
0.00216
±
0.00063
22.02
±
7.12
65.70
±
21.33
95%
CI
[
±
0.0017]
[
±
0.0025]
[
±
0.00078]
[
±
8.84]
[
±
26.48]
Moisture
0.9912
±
0.0139
0.2845
±
0.0371
0.0775
±
0.0589
17.07
±
6.57
46.47
±
17.94
95%
CI
[
±
0.0173]
[
±
0.0460]
[
±
0.0732]
[
±
8.15]
[
±
22.27]
Protein
0.9385
±
0.0188
0.1305
±
0.0147
0.0754
±
0.0078
4.18
±
0.65
15.41
±
1.46
95%
CI
[
±
0.0234]
[
±
0.0182]
[
±
0.0097]
[
±
0.80]
[
±
1.81]
3.3.2.
Signicance
test
This
study
e
v
aluated
the
paired
cross-v
alidation
folds
globally
(
N
=
20
)
using
a
tw
o-sided
W
ilcoxon
signed-rank
test.
T
o
pre
v
ent
type
I
errors
across
the
six
e
v
aluation
metrics,
we
applied
the
Benjamini-Hochber
g
procedure
to
control
the
f
alse
disco
v
ery
rate
(
α
=
0
.
05
).
The
statistical
analysis
re
v
ealed
no
signicant
dif
ference
in
performance
between
the
ra
w
and
preprocessed
pipelines.
As
detailed
in
T
able
3,
the
corrected
p
-v
alues
for
primary
metrics
such
as
R
2
(
q
=
0
.
5429
)
and
RPD
(
q
=
0
.
1322
)
conrm
that
the
addition
of
preprocessing
does
not
yield
a
statistically
signicant
impro
v
ement.
In
this
table,
corrected
p
-v
alues
were
adjusted
using
the
Benjamini-Hochber
g
procedure
to
control
the
f
alse
disco
v
ery
rate.
T
able
3.
P
aired
W
ilcoxon
signed-rank
test
results:
preprocessed
vs.
ra
w
data
(
N
=
20
)
Metric
W
i
lcoxon
stat
Ra
w
p
-v
alue
Corrected
p
-v
alue
Signicant
(
α
=
0
.
05
)
R
2
82.0
0.4091
0.5429
F
alse
RMSEp
80.0
0.3683
0.5429
F
alse
MAE
96.0
0.7562
0.7562
F
alse
MAPE
84.0
0.4524
0.5429
F
alse
RPD
51.0
0.0441
0.1322
F
alse
RER
51.0
0.0441
0.1322
F
alse
3.3.3.
Data
efciency
T
o
assess
model
generalization
as
a
function
of
data
a
v
ailability
,
this
study
conducted
a
data-ef
cienc
y
analysis
by
v
arying
the
training
set
size
(25%,
50%,
75%,
and
100%).
As
detailed
in
T
able
4,
performance
Int
J
Artif
Intell,
V
ol.
15,
No.
5,
October
2026:
4512–4522
Evaluation Warning : The document was created with Spire.PDF for Python.
Int
J
Artif
Intell
ISSN:
2252-8938
❒
4517
scales
consistently
with
a
v
ailable
data.
W
ith
25%
of
the
data,
the
model
under
generalized
(
R
2
v
alues
ranging
from
0
.
48
for
moisture
to
0
.
73
for
total
f
at).
Performance
impro
v
ed
sharply
as
the
sample
size
increased,
and
with
75%
of
the
data
used
for
training,
all
tar
gets
achie
v
ed
R
2
≥
0
.
90
.
Using
100%
of
the
data
produced
peak
performance
(
R
2
>
0
.
93
for
all
tar
gets,
with
f
at
and
f
atty
acid
abo
v
e
0
.
99
),
while
g
ains
from
75%
to
100%
became
smaller
,
indicating
an
approaching
plateau.
T
able
4.
Summary
of
R
2
scores
across
v
arying
training
data
fractions
T
ar
get
25%
50%
75%
100%
T
otal
f
at
0
.
73
±
0
.
08
0
.
87
±
0
.
04
0
.
96
±
0
.
01
0
.
995
±
0
.
004
F
atty
acid
0
.
61
±
0
.
13
0
.
79
±
0
.
12
0
.
94
±
0
.
04
0
.
997
±
0
.
001
Moisture
0
.
48
±
0
.
22
0
.
85
±
0
.
09
0
.
92
±
0
.
04
0
.
991
±
0
.
014
Protein
0
.
49
±
0
.
17
0
.
74
±
0
.
16
0
.
90
±
0
.
01
0
.
939
±
0
.
019
3.3.4.
Ablation
study
T
o
systematically
v
erify
the
architectural
contrib
utions
of
the
proposed
model,
an
ablation
study
w
as
conducted.
This
study
compared
the
optimal
multi-block
CNN
ag
ainst
a
monolithic
CNN
v
ariant
(single
block)
with
a
comparable
parameter
count,
which
ef
fecti
v
ely
r
emo
v
es
the
spectral
se
gmentation
mechanism.
As
sho
wn
in
T
able
5,
the
monolithic
CNN
(1
block)
f
ailed
to
model
the
data
ef
fecti
v
ely
under
the
nested
CV
protocol.
This
drastic
performance
g
ap
conrms
that
se
gmenting
the
spectrum
enabl
es
the
netw
ork
to
learn
localized,
distinct
feature
maps
t
hat
are
otherwise
lost
when
global
pooling
is
applied
to
the
entire
ra
w
spectrum.
T
able
5.
Impact
of
block
se
gmentation
on
model
performance
(total
f
at
dataset)
Architecture
R
2
(Mean
±
SD)
R
M
S
E
p
RPD
RER
Multi-block
(proposed)
0
.
995
±
0
.
004
0
.
019
±
0
.
007
17
.
35
±
5
.
23
45
.
94
±
13
.
89
Monolithic
(single
block)
0
.
267
±
0
.
068
0
.
250
±
0
.
012
1
.
18
±
0
.
05
3
.
21
±
0
.
15
3.3.5.
P
ermutation
test
f
or
model
r
ob
ustness
T
o
v
erify
that
the
proposed
deep
multi-block
CNN
learns
genuine
w
a
v
elength–chemical
relationshi
ps
rather
than
spurious
correlations
or
dataset
artif
acts,
a
tar
get
permutation
test
(y-randomization)
w
as
performed.
In
this
e
xperiment,
the
tar
get
v
ariables
(f
at,
f
atty
acid,
moisture,
and
protein)
were
randomly
permuted
with
respect
to
the
NIR
spectral
inputs,
thereby
completely
destro
ying
the
structural
relationship
between
the
predictor
matrix
(
X
)
and
the
response
v
ector
(
y
).
Using
the
pre
viously
optimized
h
yperparameter
congurations,
the
model
w
as
re-e
v
aluated
under
identical
5-fold
cross-v
alidation
conditions.
Under
proper
model
beha
vior
,
remo
v
al
of
the
X
–
y
dependenc
y
should
lead
to
a
collapse
in
predicti
v
e
performance.
The
results
are
summarized
in
T
able
6.
T
able
6.
Model
performance
follo
wing
y-randomization
across
5-fold
cross-v
alidation
(mean
±
SD)
T
ar
get
R
2
R
M
S
E
p
RPD
RER
T
otal
f
at
0
.
0087
±
0
.
0182
0
.
2983
±
0
.
0167
1
.
0124
±
0
.
0093
2
.
6841
±
0
.
1513
F
atty
acid
−
0
.
0089
±
0
.
0330
0
.
0436
±
0
.
0021
1
.
0038
±
0
.
0160
3
.
0099
±
0
.
1439
Moisture
0
.
0035
±
0
.
0637
1
.
0006
±
0
.
0360
1
.
0108
±
0
.
0306
2
.
7647
±
0
.
0771
Protein
−
0
.
0020
±
0
.
0353
0
.
3114
±
0
.
0336
1
.
0073
±
0
.
0176
3
.
7476
±
0
.
3962
As
e
xpected,
eliminating
the
true
X
–
y
relationship
reduced
predicti
v
e
performance
to
near
-random
le
v
els
across
all
tar
gets.
The
R
2
approached
zero
or
became
ne
g
ati
v
e,
indicating
no
e
xplanatory
po
wer
.
Lik
e
wise,
the
RPD
con
v
er
ged
to
approximately
1.0,
which
in
chemometric
interpretation
corresponds
to
performance
equi
v
alent
to
predicting
the
mean
v
alue
for
all
samples.
These
results
conrm
that
the
high
predicti
v
e
accurac
y
observ
ed
on
the
structured
dataset
arises
from
meaningful
spectral–chemi
cal
correlations
rather
than
o
v
ertting,
memorization,
or
background
artif
acts.
The
permutation
analysis
therefore
pro
vides
strong
statistical
e
vidence
of
genuine
model
generalization.
3.3.6.
Str
ess
testing
via
articial
noise
injection
T
o
further
quantify
the
model’
s
resil
ience
to
instrumental
de
gradation,
a
systematic
stress
test
w
as
conducted
by
injecting
articial
Gaussian
noise
into
the
test
set
spectra.
Gaussian
noise,
dened
as
N
(0
,
σ
2
)
,
w
as
added
to
the
standardized
spectral
inputs,
where
σ
represents
the
SD
of
the
noise
le
v
el
relati
v
e
to
the
original
spectral
v
ariance.
The
noise
intensity
w
as
incrementally
scaled
from
σ
=
0
.
01
(lo
w
noise)
to
σ
=
0
.
10
Deep
multi-bloc
k
con
volutional
neur
al
network
for
quantitative
near
-infr
ar
ed
...
(Hilmy
Abidzar
T
awakal)
Evaluation Warning : The document was created with Spire.PDF for Python.
4518
❒
ISSN:
2252-8938
(se
v
ere
noise).
The
pre-trained
multi-block
CNN
w
as
then
e
v
aluated
on
these
corrupted
datasets
across
all
5-folds
without
retraining
the
model.
The
resulting
a
v
erage
R
2
for
each
property
is
presented
in
T
able
7.
T
able
7.
Model
performance
de
gradation
(
R
2
)
under
increasing
le
v
els
of
articial
Gaussian
noise
Noise
le
v
el
(
σ
)
T
otal
f
at
(
R
2
)
F
atty
acid
(
R
2
)
Moisture
(
R
2
)
Protein
(
R
2
)
0.00
(baseline)
0.9924
0.9951
0.9888
0.9368
0.01
(lo
w)
0.9891
0.9934
0.9882
0.9318
0.05
(moderate)
0.8351
0.8576
0.8887
0.8209
0.10
(se
v
ere)
0.4614
0.3385
0.6592
0.2465
As
sho
wn
in
T
able
7,
the
multi-block
CNN
demonstrates
e
xceptional
rob
ustness
at
lo
w
noise
le
v
els
(
σ
=
0
.
01
).
The
predi
cti
v
e
performance
remains
virtually
identical
to
the
baseline,
with
R
2
de
grading
by
less
than
1%
across
all
tar
get
properties.
Ev
en
under
moderate
noise
corruption
(
σ
=
0
.
05
),
the
architecture
e
xhibits
graceful
de
gradation,
maintaining
strong
predicti
v
e
capabilities
with
R
2
v
alues
remaining
abo
v
e
0.82
for
all
properties.
A
substantial
collapse
in
predicti
v
e
performance
is
only
observ
ed
under
se
v
ere
articial
corruption
(
σ
=
0
.
10
),
where
the
injec
ted
noise
v
ariance
be
gins
to
hea
vily
mask
the
underlying
spectral
v
ariance.
Ho
we
v
er
,
such
e
xtreme
de
gradation
generally
e
xceeds
the
typical
operational
v
ariance
observ
ed
in
modern,
calibrated
F
ourier
transform
near
-infrared
(FT
-NIR)
spectrometers.
Ultimately
,
these
results
empiricall
y
v
alidate
the
model’
s
operational
reliability
in
real-w
orld
scanning
en
vironments,
conrming
its
ability
to
maintain
high
accurac
y
without
the
strict
need
for
traditional
scatter
-correction
preprocessing
algorithms.
3.4.
Discussion
The
e
xperimental
results
demonstrate
that
the
proposed
multi-block
CNN
model
signicantly
outperforms
both
traditional
and
other
deep
l
earning-based
approaches
for
quantitati
v
e
NIR
analysis.
Its
ability
to
operate
directly
on
ra
w
spectra
presents
a
major
adv
antage.
This
is
demonstrated
by
its
e
xceptional
performance
on
the
ra
w
f
atty
acid
dataset
(
R
2
=
0
.
997
±
0
.
001
).
A
k
e
y
architectural
adv
antage
is
the
balance
between
model
capacity
and
generalizat
ion.
While
deeper
architectures
lik
e
DeepSpectra
and
SpectraV
GG
ha
v
e
sho
wn
strong
performance,
the
y
can
risk
o
v
er
tting
on
smaller
datasets
[5],
[13].
The
multi-block
CNN
combines
depth
(in
its
dense
layers)
with
width
(via
spectral
se
gmentation),
which
pro
v
ed
to
be
a
more
rob
ust
strate
gy
for
this
task.
Despite
its
success,
the
model
has
se
v
eral
limitations.
The
lo
west
performance
w
as
observ
ed
for
protein
prediction
(
R
2
=
0
.
939
±
0
.
019
),
a
well-kno
wn
challenge
in
traditional
NIR
analysis
due
to
subtle,
often
noisy
spectral
signals.
T
o
in
v
estig
ate
ho
w
our
model
handled
this
challenge,
we
generated
salienc
y
maps
to
visualize
its
internal
feature-ranking
process
[5].
The
results,
sho
wn
in
Figure
3,
pro
vide
a
clear
visual
e
xplanation
for
the
performance
disparity
.
The
model
in
the
gure
identies
multiple,
distrib
uted,
and
subtle
spectral
re
gions
for
the
more
challenging
protein
prediction.
In
contrast,
it
focuses
on
a
single,
highly
concentrated,
and
dominant
re
gion
for
the
high-performing
f
atty
acid
prediction.
Bright
yello
w
indicates
high
importance.
The
salienc
y
map
for
the
protein
sho
wn
in
Figure
3(a)
re
v
eals
that
the
model
identies
multiple
dif
fuse
re
gions
of
importance
across
the
spectrum.
Th
i
s
conrms
that
the
spectral
signature
for
protein
is
comple
x
and
lacks
a
single
dominant
feature.
In
stark
contrast,
Figure
3(b)
presents
the
salienc
y
map
for
f
atty
acid,
one
of
the
best-performing
models.
The
model
focuses
its
attention
on
a
single,
highly
concentrated,
and
dominant
re
gion
at
the
start
of
the
spectrum.
This
vi
sual
e
vidence
strongly
suggests
that
the
model’
s
superior
performance
on
f
atty
acids
is
due
to
its
ability
to
identify
a
l
ocalized,
information-rich
spectral
s
ignature,
a
task
that
is
signicantly
more
challenging
for
the
subtle,
distrib
uted
features
of
proteins.
In
terms
of
generalizability
,
the
modula
r
,
block-based
architecture
is
not
inherently
limited
to
rice
spectra.
Its
ability
to
learn
localized
features
from
1D
data
mak
es
it
a
strong
candidate
for
other
quantitati
v
e
spectral
analyses,
b
uilding
on
the
gro
wing
body
of
w
ork
applying
CNNs
to
v
arious
spectral
challenges
[25].
The
core
principle
of
se
gmenting
a
signal
to
isolat
e
localized
information
is
broadly
applicable.
In
addition
to
absolute
performance,
the
SDs
across
runs
were
lo
w
,
conrming
the
model’
s
reproducibilit
y
and
stability
.
The
lo
w
root
mean
squared
error
(RMSE)
and
MAPE
v
alues
for
f
atty
acid
and
moisture
predictions,
in
particular
,
emphasize
the
model’
s
suitability
for
precise,
real-time
applications
such
as
food
quality
monitoring
or
on-site
agricultural
screening.
Int
J
Artif
Intell,
V
ol.
15,
No.
5,
October
2026:
4512–4522
Evaluation Warning : The document was created with Spire.PDF for Python.
Int
J
Artif
Intell
ISSN:
2252-8938
❒
4519
(a)
(b)
Figure
3.
Feature
importance
maps
for
(a)
protein
prediction
and
(b)
f
atty
acid
prediction
3.5.
Futur
e
w
ork
Future
w
ork
should
focus
on
impro
ving
performance
for
challenging
tar
gets
lik
e
proteins.
This
could
in
v
olv
e
e
xploring
h
ybrid
architectures
that
inte
grate
the
multi-block
CNN
with
transformer
or
attention
mechanisms
to
better
model
long-range
spectral
dependencies
and
emphasize
subtle
features.
Additionally
,
in
v
estig
ating
transfer
learning
to
adapt
the
model
across
dif
ferent
crops
or
instruments
and
deplo
ying
the
model
on
portable
NIR
de
vices
for
edge
articial
intelligence
applications
represent
promising
directions
for
making
this
technology
more
accessible
for
real-time
quality
control.
4.
CONCLUSION
This
study
introduced
a
no
v
el
deep
multi-bl
o
c
k
CNN
architecture
for
quantitati
v
e
NIR
spe
ctral
analysis,
inte
grating
feature
e
xtraction
and
calibration
into
a
single,
intelligent
system.
The
proposed
model
Deep
multi-bloc
k
con
volutional
neur
al
network
for
quantitative
near
-infr
ar
ed
...
(Hilmy
Abidzar
T
awakal)
Evaluation Warning : The document was created with Spire.PDF for Python.
4520
❒
ISSN:
2252-8938
demonstrated
superior
performance
o
v
er
both
traditional
chemometric
methods
and
other
deep
learning
architectures,
achie
ving
state-of-the-art
results
in
predicting
f
atty
acid,
moisture,
and
t
otal
f
at
in
rice.
The
k
e
y
contrib
ution
of
this
w
ork
i
s
an
end-to-end
model
that
can
operate
directly
on
ra
w
spectra
without
con
v
entional
preprocessing,
thereby
simplifying
the
analysis
pipeline
and
reducing
dependence
on
do
m
ain
e
xpertise.
This
study
statistically
v
alidated
that
the
model’
s
performance
on
ra
w
data
is
equi
v
alent
to
its
performance
with
optimized
preprocessing.
The
architecture’
s
no
v
elty
lies
in
its
use
of
spectral
se
gmentation
and
parallel
processing,
which
enables
it
to
learn
localized
features
ef
fecti
v
ely
and
autonomously
,
a
signicant
impro
v
ement
o
v
er
monolithic,
end-to-end
models.
FUNDING
INFORMA
TION
This
research
is
funded
by
the
Ministry
of
Research,
T
echnology
,
and
Education
through
the
doctoral
dissertation
research
program
(PDD),
with
the
title
”Preprocessing
method
of
NIR
spectrum
based
on
CNN
for
estimation
of
rice
quality”
and
the
number
0536/E5/PG.02.00/2023.
A
UTHOR
CONTRIB
UTIONS
ST
A
TEMENT
This
journal
uses
the
Contrib
utor
Roles
T
axonomy
(CRediT)
to
recognize
indi
vidual
author
contrib
utions,
reduce
authorship
disputes,
and
f
acilitate
collaboration.
Name
of
A
uthor
C
M
So
V
a
F
o
I
R
D
O
E
V
i
Su
P
Fu
Hilmy
Abidzar
T
a
w
akal
✓
✓
✓
✓
✓
✓
✓
✓
✓
Y
ohanes
Aris
Purw
anto
✓
✓
✓
✓
✓
✓
Son
y
Hartono
W
ijaya
✓
✓
✓
✓
Shelvie
Nidya
Ne
yman
✓
✓
✓
✓
C
:
C
onceptualization
I
:
I
n
v
estig
ation
V
i
:
V
i
sualization
M
:
M
ethodology
R
:
R
esources
Su
:
Su
pervision
So
:
So
ftw
are
D
:
D
ata
Curation
P
:
P
roject
Administration
V
a
:
V
a
lidation
O
:
Writing
-
O
riginal
Draft
Fu
:
Fu
nding
Acquisition
F
o
:
F
o
rmal
Analysis
E
:
Writing
-
Re
vie
w
&
E
diting
CONFLICT
OF
INTEREST
ST
A
TEMENT
The
authors
declare
that
the
y
ha
v
e
no
kno
wn
competing
nancial
interests
or
personal
relat
ionships
that
could
ha
v
e
appeared
to
inuence
the
w
ork
reported
in
this
paper
.
Furthermore,
the
authors
conrm
that
this
study
w
as
conducted
independently
and
that
no
e
xternal
interests,
af
liations,
or
personal
relationships
inuenced
the
research
design,
data
analysis,
interpretation
of
the
results,
or
preparation
of
the
manuscript.
INFORMED
CONSENT
This
section
is
not
applicable.
This
study
did
not
in
v
olv
e
human
participants,
human
data,
or
an
y
personally
identiable
informat
ion.
All
data
used
were
either
publicly
a
v
ailable,
fully
anon
ymized,
or
deri
v
ed
from
non-human
sources,
and
therefore
no
informed
consent
w
as
required
from
indi
viduals.
ETHICAL
APPR
O
V
AL
This
section
is
not
applicable.
This
research
did
not
in
v
olv
e
human
subjects,
human
biological
materials,
or
e
xperimental
procedures
on
animals.
The
w
ork
w
as
conducted
solely
on
computational
models,
publicly
a
v
ailabl
e
datasets,
or
non-sensiti
v
e
data
that
did
not
require
interv
ention
with
li
ving
or
g
anisms.
Therefore,
ethical
appro
v
al
from
an
institutional
re
vie
w
board
or
animal
ethics
committee
w
as
not
necessary
for
this
study
.
Int
J
Artif
Intell,
V
ol.
15,
No.
5,
October
2026:
4512–4522
Evaluation Warning : The document was created with Spire.PDF for Python.
Int
J
Artif
Intell
ISSN:
2252-8938
❒
4521
D
A
T
A
A
V
AILABILITY
The
data
that
support
the
ndings
of
this
study
are
a
v
ailable
from
the
corresponding
author
,
[Y
AP],
upon
reasonable
request.
The
data,
which
were
collected
from
proprietary
rice
samples
measured
with
portable
NIR
spectroscop
y
,
are
not
publ
icly
a
v
ailable
due
to
restrictions
related
to
ongoing
research
and
institutional
data-sharing
policies.
Synthetic
data
schemas
replicating
the
struct
u
r
e
of
the
original
datasets,
along
with
the
e
xperimental
code
used
to
produce
results
in
this
paper
,
are
a
v
ailable
upon
request
to
f
acilitate
reproducibility
.
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Deep
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quantitative
near
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ar
ed
...
(Hilmy
Abidzar
T
awakal)
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